Convenience wrapper to generate a 2 strain type comparison. strain 1 will have suffix .s1 and strain 2 will have .s2

getTwoAlternativesDataset(
  scenario1,
  scenario2,
  delayMean1,
  delayMean2,
  delaySd1 = delayMean1/4,
  delaySd2 = delayMean2/4,
  timepoints = nrow(scenario1$ts),
  ...
)

Arguments

scenario1

a growthSimulation scenario for the s1 strain

scenario2

a growthSimulation scenario for the s2 strain

delayMean1

a delay distribution parameter for the s1 strain

delayMean2

a delay distribution parameter for the s2 strain

delaySd1

a delay distribution parameter for the s1 strain

delaySd2

a delay distribution parameter for the s2 strain

timepoints

times at which to generate observed time series.

...

Value

a 2 strain dataset in wide format.