Convenience method to generate a random growth rate simulation

Convenience method to generate a random growth rate simulation

getGrowthRateBasedDataset(
  growthSimulation = NULL,
  bootstraps = 100,
  seed = 100,
  weekendEffect = 0.1,
  Gt.mean = 5,
  Gt.sd = 4,
  periodic = FALSE,
  name = "synthetic",
  ...
)

Arguments

growthSimulation

- optional growth rate timeseries, if missing a random one is generated
bootstraps

- ho many replicates
seed

- what initial case loads
weekendEffect

- any weekend effect?
Gt.mean

- generation time mean
Gt.sd

- generation time sd
periodic

- a random periodic or
name

- a name for the simulation
...

Value

a single strain random simulation with sensible parameters and no observation delay